{ "cells": [ { "cell_type": "markdown", "metadata": { "id": "HozF_O0VM6-B" }, "source": [ "This notebook is a brief guide of downloading LRIS raw (level 0) data in a given period. It requires PI credentials to access proprietary data. For more detail about PyKOA, please see:\n", "http://koa.ipac.caltech.edu/UserGuide/PyKOA/notebooks/PyKOA_LRIS_introduction.html" ] }, { "cell_type": "markdown", "metadata": { "id": "mmPy9VTCNrt-" }, "source": [ "First, we need to install the KOA python client PyKOA. This line can be removed if PyKOA is already installed." ] }, { "cell_type": "code", "execution_count": null, "metadata": { "colab": { "base_uri": "https://localhost:8080/" }, "id": "T3H-B5qiOHGo", "outputId": "b8d8ffb7-f739-4099-ce9f-52d61dbd4c98" }, "outputs": [ { "output_type": "stream", "name": "stdout", "text": [ "Collecting pykoa\n", " Downloading pykoa-1.7.2-py3-none-any.whl (29 kB)\n", "Requirement already satisfied: requests in /usr/local/lib/python3.10/dist-packages (from pykoa) (2.27.1)\n", "Collecting xmltodict (from pykoa)\n", " Downloading xmltodict-0.13.0-py2.py3-none-any.whl (10.0 kB)\n", "Collecting bs4 (from pykoa)\n", " Downloading bs4-0.0.1.tar.gz (1.1 kB)\n", " Preparing metadata (setup.py) ... \u001b[?25l\u001b[?25hdone\n", "Requirement already satisfied: lxml in /usr/local/lib/python3.10/dist-packages (from pykoa) (4.9.3)\n", "Requirement already satisfied: beautifulsoup4 in /usr/local/lib/python3.10/dist-packages (from bs4->pykoa) (4.11.2)\n", "Requirement already satisfied: urllib3<1.27,>=1.21.1 in /usr/local/lib/python3.10/dist-packages (from requests->pykoa) (1.26.16)\n", "Requirement already satisfied: certifi>=2017.4.17 in /usr/local/lib/python3.10/dist-packages (from requests->pykoa) (2023.5.7)\n", "Requirement already satisfied: charset-normalizer~=2.0.0 in /usr/local/lib/python3.10/dist-packages (from requests->pykoa) (2.0.12)\n", "Requirement already satisfied: idna<4,>=2.5 in /usr/local/lib/python3.10/dist-packages (from requests->pykoa) (3.4)\n", "Requirement already satisfied: soupsieve>1.2 in /usr/local/lib/python3.10/dist-packages (from beautifulsoup4->bs4->pykoa) (2.4.1)\n", "Building wheels for collected packages: bs4\n", " Building wheel for bs4 (setup.py) ... \u001b[?25l\u001b[?25hdone\n", " Created wheel for bs4: filename=bs4-0.0.1-py3-none-any.whl size=1257 sha256=a00241eab3cdfac040fecf318c1ff06bcb03ee9bae48faf94ae5d2a057c069ff\n", " Stored in directory: /root/.cache/pip/wheels/25/42/45/b773edc52acb16cd2db4cf1a0b47117e2f69bb4eb300ed0e70\n", "Successfully built bs4\n", "Installing collected packages: xmltodict, bs4, pykoa\n", "Successfully installed bs4-0.0.1 pykoa-1.7.2 xmltodict-0.13.0\n" ] } ], "source": [ "!pip install pykoa" ] }, { "cell_type": "markdown", "metadata": { "id": "hhVJIWD0OKsS" }, "source": [ "The next steop is to import pre-requisite packages" ] }, { "cell_type": "code", "execution_count": null, "metadata": { "id": "4G2fXjioOKBa" }, "outputs": [], "source": [ "import sys\n", "import io\n", "import os\n", "from pykoa.koa import Koa\n", "from astropy.table import Table,Column" ] }, { "cell_type": "markdown", "metadata": { "id": "9jJgI5RBOOOX" }, "source": [ "Then we need to assign directory that stores the query results:" ] }, { "cell_type": "code", "execution_count": null, "metadata": { "id": "OB_GgjpsOXVk" }, "outputs": [], "source": [ "try:\n", " os.mkdir('./output')\n", "except:\n", " print(\" Directory exists already\", flush=True)" ] }, { "cell_type": "markdown", "metadata": { "id": "Q3-Uu0RiOWm9" }, "source": [ "After that, we use a cookie for KOA log in. We can also spell out the credentials, but for security purpose, it is better to enter the userid and password interactively" ] }, { "cell_type": "code", "execution_count": null, "metadata": { "colab": { "base_uri": "https://localhost:8080/" }, "id": "olSx2E55OcgS", "outputId": "6c292ca4-c3f2-4335-8b8a-4940cf5932de" }, "outputs": [ { "output_type": "stream", "name": "stdout", "text": [ "Userid: clee\n", "Password: ··········\n", "Successfully login as clee\n" ] } ], "source": [ "Koa.login ('./tapcookie.txt')\n", "#Koa.login ('./tapcookie.txt', userid='clee', password='salami')" ] }, { "cell_type": "markdown", "metadata": { "id": "kBQdEWm9OdOs" }, "source": [ "We can then proceed to query LRIS data taken in a given period. Note the time period is specified in UT date. The output table will be saved in the designated directory and in IPAC table format." ] }, { "cell_type": "code", "execution_count": null, "metadata": { "colab": { "base_uri": "https://localhost:8080/" }, "id": "VaeWQLWROveh", "outputId": "9f6f7a26-3541-4581-f286-6f88eceeb805" }, "outputs": [ { "output_type": "stream", "name": "stdout", "text": [ "submitting request...\n", "Result downloaded to file [./output/lris_daterange.tbl]\n", " koaid instrume object ... semid propint\n", " ... \n", "---------------------- -------- -------------- ... ---------- -------\n", "LR.20210604.00962.fits LRIS -- ... 2021a_c229 18\n", "LR.20210604.01618.fits LRIS -- ... 2021a_c229 18\n", "LR.20210604.02144.fits LRIS -- ... 2021a_c229 18\n", "LB.20210604.02272.fits LRISBLUE bias ... 2021a_c229 18\n", "LR.20210604.02304.fits LRIS -- ... 2021a_c229 18\n", "LR.20210604.06139.fits LRIS -- ... 2021a_c229 18\n", "LR.20210604.07217.fits LRIS -- ... 2021a_c229 18\n", "LB.20210604.07262.fits LRISBLUE bias ... 2021a_c229 18\n", "LR.20210604.07265.fits LRIS -- ... 2021a_c229 18\n", "LR.20210604.07307.fits LRIS -- ... 2021a_c229 18\n", " ... ... ... ... ... ...\n", "LB.20210604.51143.fits LRISBLUE MIRA PMFM -350 ... 2021a_c229 18\n", "LR.20210604.51144.fits LRIS -- ... 2021a_c229 18\n", "LR.20210604.51589.fits LRIS -- ... 2021a_c229 18\n", "LB.20210604.51591.fits LRISBLUE MIRA PMFM -350 ... 2021a_c229 18\n", "LR.20210604.52634.fits LRIS -- ... 2021a_c229 18\n", "LB.20210604.52645.fits LRISBLUE MIRA PMFM -350 ... 2021a_c229 18\n", "LR.20210604.53271.fits LRIS -- ... 2021a_c229 18\n", "LB.20210604.53282.fits LRISBLUE MIRA PMFM -350 ... 2021a_c229 18\n", "LR.20210604.53915.fits LRIS -- ... 2021a_c229 18\n", "LB.20210604.53919.fits LRISBLUE MIRA PMFM -350 ... 2021a_c229 18\n", "Length = 233 rows\n" ] } ], "source": [ "Koa.query_datetime ('lris', \\\n", " '2021-06-04 00:00:00/2021-06-04 23:59:59', \\\n", " './output/lris_daterange.tbl', overwrite=True, format='ipac', \\\n", " cookiepath='./tapcookie.txt')\n", "\n", "rec = Table.read ('./output/lris_daterange.tbl',format='ipac')\n", "print (rec)\n" ] }, { "cell_type": "markdown", "metadata": { "id": "KV5BDsU4Osxd" }, "source": [ "Once we have the query result, we can download files to the designated directory, in this case to dnload_dir_lris/. If the download function is called several times, it will check the designated directory and only download new files." ] }, { "cell_type": "code", "execution_count": null, "metadata": { "colab": { "base_uri": "https://localhost:8080/" }, "id": "KxRXJeruPLET", "outputId": "6d95ce16-d1b9-4822-fcbd-be5f32dae07f" }, "outputs": [ { "output_type": "stream", "name": "stdout", "text": [ "Start downloading 233 koaid data you requested;\n", "please check your outdir: dnload_dir_lris for progress ....\n", "\n", "A total of 233 new lev0 FITS files downloaded.\n" ] } ], "source": [ "Koa.download ('./output/lris_daterange.tbl',\n", " 'ipac', \\\n", " 'dnload_dir_lris' )" ] } ], "metadata": { "colab": { "provenance": [] }, "kernelspec": { "display_name": "Python 3 (ipykernel)", "language": "python", "name": "python3" }, "language_info": { "codemirror_mode": { "name": "ipython", "version": 3 }, "file_extension": ".py", "mimetype": "text/x-python", "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", "version": "3.11.3" } }, "nbformat": 4, "nbformat_minor": 0 }